Exploratory project IMMO (2021 - 2023)

Visualising fish oocytes using AI and 3D imaging

In the natural environment as well as in fish farming, the process of formation and maturation of female gametes (oogenesis) is essential for reproductive success.

Background and challenges

In multiple-spawning fishes, oogenesis involves anatomical structures in permanent renewal, the ovarian follicles, which accompany the development of the gametes until spawning. Despite the identification of numerous regulatory mechanisms of oogenesis in model fish (e.g. medaka, zebrafish), we still have an incomplete and mainly qualitative view of this dynamic process. In particular, major questions remain unanswered: Is there a detectable ageing of ovarian function? What are the key controls on ovarian follicles at different stages of maturity and to what extent is the follicle population self-controlled?

Goals

Densité ovarienne en fonction de la taille et de l'âge

Densité ovarienne en fonction de la taille et de l'âge

The IMMO project proposes to exploit new 3D imaging and Artificial Intelligence (AI) methods to visualise and enumerate the completeness of oocytes in fish ovaries at different ages, in order to comprehensively and quantitatively describe the entire population of ovarian follicles and oocytes.

These data will be used to validate a mathematical model describing follicular dynamics and their controls over the life span of the fish, which will reveal information not available from the data alone. The model simulations will reproduce the different types of disturbances affecting the proper functioning of oogenesis.

Contact - coordination :

Partnerships

INRAE participants

Animal Physiology and Livestock Systems division

Expertise

LPGP

Reproductive biology, Imaging and image analysis

UMR PRC

Mathematical analysis, intracellular signalling, pharmacology

Partners

INRIA

Expertise

Équipe-projet MUSCA (INRIA-CNRS-INRAE) - : MUltiSCAle population dynamics for physiological systems

Mathematical modelling/ Reproductive physiology

Mathematical analysis

Modification date : 06 May 2024 | Publication date : 06 January 2022 | Redactor : Com